Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06295912_10134 | Not Available | Negative | 33098 - 34225 | 41267.2 |
| helix-turn-helix domain-containing protein | SAMN06295912_10135 | Not Available | Positive | 34245 - 34658 | 15440.7 |
| mfs transporter, putative metabolite:h+ symporter | SAMN06295912_10136 | Not Available | Positive | 34799 - 36052 | 44678.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295912_10137 | Not Available | Positive | 36049 - 36801 | 25386.6 |
| conserved hypothetical protein | SAMN06295912_10138 | Not Available | Negative | 36786 - 37403 | 22668.9 |
| glycosyl transferase family 2 | SAMN06295912_10139 | Not Available | Negative | 37489 - 38265 | 28576.1 |
| udp-glucose 4-epimerase | SAMN06295912_10140 | Not Available | Negative | 38262 - 39185 | 32359.0 |
| transcriptional regulator, badm/rrf2 family | SAMN06295912_10141 | Not Available | Negative | 39282 - 39731 | 16513.2 |
| Trna-his | Not Available | Not Available | Positive | 39813 - 39886 | Not Available |
| leucine dehydrogenase | SAMN06295912_10143 | Not Available | Positive | 39969 - 41018 | 36186.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.