Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phospholipid/cholesterol/gamma-hch transport system substrate-binding proteinSAMN06295912_10950Not AvailableNegative2061567 - 206252033336.1
phospholipid/cholesterol/gamma-hch transport system atp-binding proteinSAMN06295912_10951Not AvailableNegative2062527 - 206334829314.2
phospholipid/cholesterol/gamma-hch transport system permease proteinSAMN06295912_10952Not AvailableNegative2063348 - 206444838892.3
prolyl 4-hydroxylaseSAMN06295912_10953Not AvailableNegative2064512 - 206515623763.0
had-superfamily subfamily ib hydrolase, tigr01490SAMN06295912_10954Not AvailablePositive2065266 - 206593725163.4
snoal-like domain-containing proteinSAMN06295912_10955Not AvailableNegative2066045 - 206654218002.6
hypothetical proteinSAMN06295912_10956Not AvailableNegative2066704 - 206742025655.5
23s rrna (guanosine2251-2'-o)-methyltransferaseSAMN06295912_10957Not AvailableNegative2067424 - 206817926711.9
bacterial translation initiation factor 3 (bif-3)SAMN06295912_10959Not AvailableNegative2068231 - 206877020616.2
uncharacterized metal-binding protein yced, duf177 familySAMN06295912_10960Not AvailableNegative2068922 - 206945819126.7

Displaying genes 2061 – 2070 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.