Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding cassette, subfamily f, member 3SAMN06295912_10910Not AvailablePositive2022982 - 202485968030.4
d-glycerate 3-kinaseSAMN06295912_10911Not AvailablePositive2024870 - 202569429274.0
mannose-6-phosphate isomerase, type 1SAMN06295912_10912Not AvailableNegative2025681 - 202651429713.4
acetyl-coa c-acetyltransferaseSAMN06295912_10913Not AvailablePositive2026704 - 202788840003.1
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295912_10914Not AvailablePositive2027915 - 202867625899.3
acyl-homoserine-lactone acylaseSAMN06295912_10915Not AvailableNegative2028704 - 203090881332.6
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN06295912_10916Not AvailableNegative2031048 - 203139512291.6
d-amino acid dehydrogenase small subunitSAMN06295912_10917Not AvailableNegative2031421 - 203268044782.3
alanine racemaseSAMN06295912_10918Not AvailableNegative2032677 - 203382539850.9
transcriptional regulator, asnc familySAMN06295912_10919Not AvailablePositive2033945 - 203440916901.5

Displaying genes 2021 – 2030 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.