Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN06295912_10114 | Not Available | Positive | 10060 - 11235 | 41639.1 |
| thymidylate kinase | SAMN06295912_10115 | Not Available | Positive | 11253 - 11876 | 21422.2 |
| dna polymerase-3 subunit delta' | SAMN06295912_10116 | Not Available | Positive | 11873 - 12859 | 34849.2 |
| methionyl-trna synthetase | SAMN06295912_10117 | Not Available | Positive | 12863 - 14383 | 56227.6 |
| tatd dnase family protein | SAMN06295912_10118 | Not Available | Positive | 14383 - 15159 | 28283.2 |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN06295912_10119 | Not Available | Positive | 15164 - 15934 | 28177.3 |
| aspartyl protease family protein | SAMN06295912_10120 | Not Available | Positive | 15931 - 16518 | 20794.4 |
| ketosteroid isomerase homolog | SAMN06295912_10121 | Not Available | Negative | 16508 - 17032 | 19092.4 |
| hypothetical protein | SAMN06295912_10122 | Not Available | Negative | 17197 - 17853 | 22951.8 |
| rna polymerase, sigma 70 subunit, rpod | SAMN06295912_10123 | Not Available | Negative | 18054 - 20075 | 75990.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.