Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp:cob(i)alamin adenosyltransferaseSAMN06295912_10852Not AvailablePositive1907293 - 190786520196.3
ergothioneine biosynthesis protein egtbSAMN06295912_10853Not AvailablePositive1907883 - 190922349561.0
dimethylhistidine n-methyltransferaseSAMN06295912_10854Not AvailablePositive1909225 - 191019934420.5
gtp-binding proteinSAMN06295912_10855Not AvailablePositive1910256 - 191163250281.3
trna 2-thiouridine synthesizing protein aSAMN06295912_10856Not AvailablePositive1911635 - 19118357021.54
hpt domain-containing proteinSAMN06295912_10857Not AvailablePositive1911929 - 191236015766.9
small multidrug resistance pumpSAMN06295912_10858Not AvailablePositive1912430 - 191280112799.8
3-hydroxyacyl-coa dehydrogenaseSAMN06295912_10859Not AvailableNegative1912768 - 191363730389.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolaseSAMN06295912_10860Not AvailableNegative1913731 - 191434220637.3
6-phosphogluconate dehydrataseSAMN06295912_10861Not AvailableNegative1914425 - 191624563832.0

Displaying genes 1951 – 1960 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.