Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine dehydratase | SAMN06295912_107111 | Not Available | Negative | 1781004 - 1782179 | 41193.1 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN06295912_107112 | Not Available | Positive | 1782303 - 1783169 | 30034.0 |
| hypothetical protein | SAMN06295912_107113 | Not Available | Positive | 1783166 - 1784824 | 58693.5 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN06295912_107114 | Not Available | Positive | 1784894 - 1785580 | 25069.3 |
| iron complex outermembrane recepter protein | SAMN06295912_107115 | Not Available | Positive | 1785812 - 1788256 | 88451.6 |
| Trna-glu | Not Available | Not Available | Positive | 1788391 - 1788466 | Not Available |
| hypothetical protein | SAMN06295912_107117 | Not Available | Positive | 1788577 - 1790388 | 67600.7 |
| parb-like nuclease domain-containing protein | SAMN06295912_107118 | Not Available | Negative | 1790530 - 1791270 | 27590.6 |
| putative dna-invertase from lambdoid prophage rac | SAMN06295912_107119 | Not Available | Negative | 1791570 - 1792148 | 20622.5 |
| hypothetical protein | SAMN06295912_107120 | Not Available | Negative | 1793516 - 1793683 | 5936.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.