Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of unknown functionSAMN06295912_10771Not AvailableNegative1743735 - 174417516025.7
peptide/nickel transport system substrate-binding proteinSAMN06295912_10772Not AvailableNegative1744238 - 174569852313.0
peptide/nickel transport system substrate-binding protein/oligopeptide transport system substrate-binding proteinSAMN06295912_10773Not AvailableNegative1745695 - 174726356858.9
dna-binding protein hu-betaSAMN06295912_10774Not AvailablePositive1747444 - 17477199551.52
hypothetical proteinSAMN06295912_10775Not AvailableNegative1747807 - 174825616678.8
transcriptional regulator, tetr familySAMN06295912_10776Not AvailableNegative1748256 - 174889122791.2
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295912_10777Not AvailablePositive1749235 - 175001125775.1
protein tyrosine phosphataseSAMN06295912_10778Not AvailablePositive1750047 - 175121341039.9
integration host factor subunit betaSAMN06295912_10779Not AvailableNegative1751841 - 175211910421.6
cytochrome cSAMN06295912_10780Not AvailablePositive1752368 - 175273312598.7

Displaying genes 1791 – 1800 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.