Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-nicking endonuclease, smr domain | SAMN06295912_10741 | Not Available | Positive | 1717559 - 1718110 | 19381.4 |
| diguanylate cyclase/phosphodiesterase | SAMN06295912_10742 | Not Available | Positive | 1718197 - 1719933 | 62454.7 |
| succinyldiaminopimelate desuccinylase | SAMN06295912_10743 | Not Available | Negative | 1719935 - 1721071 | 39956.4 |
| uncharacterized conserved protein, cupin superfamily | SAMN06295912_10744 | Not Available | Positive | 1721118 - 1721567 | 16212.0 |
| h+/cl- antiporter clca | SAMN06295912_10745 | Not Available | Positive | 1721651 - 1722883 | 41884.1 |
| glutathione s-transferase | SAMN06295912_10746 | Not Available | Negative | 1722945 - 1723613 | 25318.2 |
| gtp-binding protein | SAMN06295912_10747 | Not Available | Negative | 1723715 - 1724377 | 24001.2 |
| protein translocase subunit yidc | SAMN06295912_10748 | Not Available | Negative | 1724374 - 1726080 | 62768.4 |
| ribonuclease p protein component | SAMN06295912_10749 | Not Available | Negative | 1726307 - 1726573 | 9679.02 |
| lsu ribosomal protein l34p | SAMN06295912_10750 | Not Available | Negative | 1726660 - 1726794 | 5007.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.