Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylaseSAMN06295912_10731Not AvailableNegative1707458 - 170818627199.6
dna-(apurinic or apyrimidinic site) lyaseSAMN06295912_10732Not AvailablePositive1708245 - 170907829878.1
ssu ribosomal protein s20pSAMN06295912_10733Not AvailablePositive1709154 - 17094179407.58
chromosomal replication initiator protein dnaaSAMN06295912_10734Not AvailablePositive1709818 - 171125453353.3
protein of unknown functionSAMN06295912_10735Not AvailableNegative1711457 - 171209523024.2
tryptophanyl-trna synthetaseSAMN06295912_10736Not AvailableNegative1712341 - 171334836275.7
putative peptidoglycan lipid ii flippaseSAMN06295912_10737Not AvailableNegative1713345 - 171490755672.5
protein translocase subunit secbSAMN06295912_10738Not AvailableNegative1714932 - 171544118429.8
predicted lipid-binding transport protein, tim44 familySAMN06295912_10739Not AvailablePositive1715624 - 171627123659.1
membrane-bound lytic murein transglycosylase aSAMN06295912_10740Not AvailablePositive1716268 - 171758445422.2

Displaying genes 1751 – 1760 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.