Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized membrane proteinSAMN06295912_106154Not AvailableNegative1645033 - 164540113284.3
histidine kinase-, dna gyrase b-, and hsp90-like atpaseSAMN06295912_106155Not AvailablePositive1645712 - 164693244490.2
two component transcriptional regulator, luxr familySAMN06295912_106156Not AvailableNegative1646986 - 164763324051.1
predicted na+-dependent transporterSAMN06295912_106157Not AvailablePositive1648023 - 164889230613.3
formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domainSAMN06295912_106158Not AvailableNegative1649003 - 165001037295.3
protein of unknown functionSAMN06295912_106159Not AvailableNegative1650043 - 165059119964.8
ef handSAMN06295912_106160Not AvailableNegative1650700 - 165112514944.4
peptidyl-prolyl cis-trans isomerase a (cyclophilin a)SAMN06295912_106161Not AvailablePositive1651277 - 165187921229.9
exodeoxyribonuclease iiiSAMN06295912_106162Not AvailableNegative1651898 - 165267428705.9
iron-sulfur cluster assembly accessory proteinSAMN06295912_106163Not AvailableNegative1652715 - 165305011110.1

Displaying genes 1691 – 1700 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.