Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN06295912_10654 | Not Available | Positive | 1543855 - 1544778 | 33231.8 |
| glycine/d-amino acid oxidase | SAMN06295912_10655 | Not Available | Positive | 1544848 - 1546077 | 42840.7 |
| sarcosine oxidase subunit alpha | SAMN06295912_10656 | Not Available | Positive | 1546077 - 1546358 | 9665.8 |
| thioredoxin reductase | SAMN06295912_10657 | Not Available | Positive | 1546351 - 1547718 | 45847.4 |
| glyoxylase i family protein | SAMN06295912_10658 | Not Available | Positive | 1547812 - 1548291 | 17682.3 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN06295912_10659 | Not Available | Positive | 1548449 - 1548856 | 13807.5 |
| camphor resistance protein crcb | SAMN06295912_10660 | Not Available | Positive | 1548903 - 1549280 | 12547.0 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN06295912_10661 | Not Available | Positive | 1549277 - 1550410 | 41290.0 |
| hypothetical protein | SAMN06295912_10662 | Not Available | Positive | 1550560 - 1550910 | 12582.1 |
| phosphoglycolate phosphatase | SAMN06295912_10663 | Not Available | Positive | 1550907 - 1551566 | 23457.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.