Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase, sigma 32 subunit, rpohSAMN06295912_105198Not AvailableNegative1462446 - 146335434283.3
ribosomal large subunit pseudouridine synthase dSAMN06295912_105199Not AvailableNegative1463429 - 146438533866.9
proteasome lid subunit rpn8/rpn11, contains jab1/mpn metalloenzyme (jamm) motifSAMN06295912_105200Not AvailablePositive1464403 - 146481314312.0
histidine phosphotransferase chptSAMN06295912_105201Not AvailablePositive1464910 - 146553922099.6
two-component system, chemotaxis family, sensor kinase cheaSAMN06295912_105202Not AvailablePositive1465600 - 146793682957.4
purine-binding chemotaxis protein chewSAMN06295912_105203Not AvailablePositive1467942 - 146837614767.2
two-component system, chemotaxis family, response regulator cheySAMN06295912_105204Not AvailablePositive1468456 - 146882113298.2
two-component system, chemotaxis family, response regulator chebSAMN06295912_105205Not AvailablePositive1468911 - 146994534950.4
chemotaxis protein methyltransferase cherSAMN06295912_105206Not AvailablePositive1469936 - 147075430148.2
o-acetylserine/cysteine efflux transporterSAMN06295912_105207Not AvailablePositive1470797 - 147169031259.8

Displaying genes 1511 – 1520 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.