Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine phosphatase rsbu, regulator of sigma subunit | SAMN06295912_105148 | Not Available | Positive | 1413767 - 1415893 | 73827.5 |
| ompa family protein | SAMN06295912_105149 | Not Available | Negative | 1415909 - 1416508 | 20882.5 |
| fecr family protein | SAMN06295912_105150 | Not Available | Negative | 1416505 - 1416936 | 15350.7 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN06295912_105151 | Not Available | Positive | 1416976 - 1417386 | 14086.8 |
| hypothetical protein | SAMN06295912_105152 | Not Available | Negative | 1417391 - 1417741 | 12561.3 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN06295912_105153 | Not Available | Positive | 1417916 - 1418728 | 28155.8 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN06295912_105154 | Not Available | Positive | 1418778 - 1419830 | 37754.9 |
| divalent cation tolerance protein | SAMN06295912_105155 | Not Available | Positive | 1419827 - 1420141 | 11129.2 |
| lsu ribosomal protein l13p | SAMN06295912_105156 | Not Available | Positive | 1420262 - 1420741 | 17439.5 |
| ssu ribosomal protein s9p | SAMN06295912_105157 | Not Available | Positive | 1420741 - 1421283 | 19219.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.