Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase ph | SAMN06295912_104141 | Not Available | Positive | 1215226 - 1215942 | 25553.4 |
| xtp/ditp diphosphohydrolase | SAMN06295912_104142 | Not Available | Positive | 1215939 - 1216547 | 21645.6 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN06295912_104143 | Not Available | Positive | 1216569 - 1217717 | 41059.5 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN06295912_104144 | Not Available | Negative | 1217745 - 1218932 | 40693.7 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN06295912_104145 | Not Available | Positive | 1218944 - 1219795 | 29419.7 |
| putative endonuclease | SAMN06295912_104146 | Not Available | Positive | 1219792 - 1220142 | 13162.1 |
| glutathione synthase | SAMN06295912_104147 | Not Available | Positive | 1220193 - 1221146 | 34529.4 |
| membrane protein deda, snare-associated domain | SAMN06295912_104148 | Not Available | Positive | 1221139 - 1221738 | 22403.9 |
| integrase/recombinase xerc | SAMN06295912_104149 | Not Available | Negative | 1221744 - 1222655 | 32520.4 |
| hypothetical protein | SAMN06295912_104150 | Not Available | Negative | 1222640 - 1223200 | 20194.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.