Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295912_103227 | Not Available | Negative | 1048617 - 1049387 | 26534.4 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN06295912_103228 | Not Available | Positive | 1049528 - 1051048 | 53589.0 |
| acyl-coa thioesterase | SAMN06295912_103229 | Not Available | Positive | 1051059 - 1051886 | 29297.7 |
| steroid delta-isomerase | SAMN06295912_103230 | Not Available | Positive | 1051998 - 1052429 | 15453.4 |
| arac family transcriptional regulator | SAMN06295912_103231 | Not Available | Positive | 1052447 - 1053289 | 30700.5 |
| hypothetical protein | SAMN06295912_103232 | Not Available | Negative | 1053186 - 1053965 | 28008.5 |
| hypothetical protein | SAMN06295912_103233 | Not Available | Negative | 1054256 - 1054486 | 8622.16 |
| hypothetical protein | SAMN06295912_103234 | Not Available | Positive | 1055019 - 1055873 | 31336.3 |
| muramoyltetrapeptide carboxypeptidase | SAMN06295912_103235 | Not Available | Negative | 1055958 - 1056983 | 36337.8 |
| rna polymerase rpb1, domain 5 | SAMN06295912_103236 | Not Available | Negative | 1057187 - 1057835 | 23164.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.