Vibrio xiamenensis

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio xiamenensis is a Gram-negative, rod-shaped bacterium that exhibits facultative aerobe/anaerobe characteristics, allowing it to thrive in both oxygen-rich and oxygen-depleted environments. This microbe is optimally adapted to temperatures around 32.0 °C, which suggests a preference for mesophilic conditions, often encountered in aquatic environments. The Gram-negative nature of V. xiamenensis indicates the presence of a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which may play a role in its environmental adaptability and potential interactions with other microorganisms. The rod shape of this bacterium is typical of the Vibrio genus and may contribute to its motility and colonization abilities in various habitats. Vibrio xiamenensis is likely to be found in marine or estuarine environments, where fluctuating oxygen levels and temperatures can be common. The facultative nature of its oxygen requirement suggests that it can effectively utilize available resources regardless of the oxygen concentration, which may provide it with a competitive advantage in diverse microbial communities. Overall, the ecological versatility of V. xiamenensis, characterized by its ability to thrive in varied oxygen conditions and its temperature preference, positions it as a notable player in nutrient cycling processes within aquatic ecosystems. Its adaptive traits may also indicate a role in the decomposition of organic matter in these environments, contributing to the overall health and functioning of aquatic systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio xiamenensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio xiamenensis
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio xiamenensis strain CGMCC 1.10228 genome assembly, contig:

Gene Summary

Adenine Count

1478862 bp

Thymine Count

1469162 bp

Guanine Count

1266883 bp

Cytosine Count

1284609 bp

Genome Length

5501246 bp

Protein-coding Genes

4991 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide/nickel transport system atp-binding proteinSAMN04488136_10454Not AvailablePositive1098170 - 109885325651.2
hypothetical proteinSAMN04488136_10455Not AvailablePositive1099281 - 110131174125.0
atp-dependent rna helicase rhleSAMN04488136_10456Not AvailableNegative1101389 - 110282251855.9
amino acid permeaseSAMN04488136_10457Not AvailableNegative1103099 - 110449649990.0
glycine/d-amino acid oxidaseSAMN04488136_10458Not AvailableNegative1104568 - 110586046358.9
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN04488136_10459Not AvailableNegative1105895 - 110631114876.6
ornithine cyclodeaminaseSAMN04488136_10460Not AvailableNegative1106404 - 110754341217.6
arac-type dna-binding proteinSAMN04488136_10461Not AvailablePositive1107747 - 110858031630.8
hypothetical proteinSAMN04488136_10462Not AvailablePositive1109045 - 110997433830.3
gamma-glutamylputrescine oxidaseSAMN04488136_10463Not AvailableNegative1110104 - 111138146954.3

Displaying genes 981 – 990 of 5064 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.