Vibrio xiamenensis

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio xiamenensis is a Gram-negative, rod-shaped bacterium that exhibits facultative aerobe/anaerobe characteristics, allowing it to thrive in both oxygen-rich and oxygen-depleted environments. This microbe is optimally adapted to temperatures around 32.0 °C, which suggests a preference for mesophilic conditions, often encountered in aquatic environments. The Gram-negative nature of V. xiamenensis indicates the presence of a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which may play a role in its environmental adaptability and potential interactions with other microorganisms. The rod shape of this bacterium is typical of the Vibrio genus and may contribute to its motility and colonization abilities in various habitats. Vibrio xiamenensis is likely to be found in marine or estuarine environments, where fluctuating oxygen levels and temperatures can be common. The facultative nature of its oxygen requirement suggests that it can effectively utilize available resources regardless of the oxygen concentration, which may provide it with a competitive advantage in diverse microbial communities. Overall, the ecological versatility of V. xiamenensis, characterized by its ability to thrive in varied oxygen conditions and its temperature preference, positions it as a notable player in nutrient cycling processes within aquatic ecosystems. Its adaptive traits may also indicate a role in the decomposition of organic matter in these environments, contributing to the overall health and functioning of aquatic systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio xiamenensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio xiamenensis
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio xiamenensis strain CGMCC 1.10228 genome assembly, contig:

Gene Summary

Adenine Count

1478862 bp

Thymine Count

1469162 bp

Guanine Count

1266883 bp

Cytosine Count

1284609 bp

Genome Length

5501246 bp

Protein-coding Genes

4991 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr02647 family proteinSAMN04488136_10754Not AvailablePositive1730358 - 17305948512.99
nucleoside-diphosphate-sugar epimeraseSAMN04488136_10755Not AvailablePositive1730752 - 173157330067.0
duf218 domain-containing proteinSAMN04488136_10756Not AvailablePositive1731584 - 173222824602.3
atp-dependent clp protease atp-binding subunit clpaSAMN04488136_10757Not AvailableNegative1732320 - 173459083645.0
atp-dependent clp protease adaptor protein clpsSAMN04488136_10758Not AvailableNegative1734638 - 173495812216.7
cold shock protein (beta-ribbon, cspa family)SAMN04488136_10759Not AvailablePositive1735432 - 17356538013.35
isocitrate dehydrogenaseSAMN04488136_10760Not AvailableNegative1735736 - 173795880092.4
23s rrna pseudouridine2457 synthaseSAMN04488136_10761Not AvailablePositive1738246 - 173892625570.7
aspartyl-trna synthetaseSAMN04488136_10762Not AvailableNegative1739054 - 174083265773.9
uncharacterized conserved protein yece, duf72 familySAMN04488136_10763Not AvailablePositive1741141 - 174197431762.2

Displaying genes 1551 – 1560 of 5064 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.