Vibrio xiamenensis

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio xiamenensis is a Gram-negative, rod-shaped bacterium that exhibits facultative aerobe/anaerobe characteristics, allowing it to thrive in both oxygen-rich and oxygen-depleted environments. This microbe is optimally adapted to temperatures around 32.0 °C, which suggests a preference for mesophilic conditions, often encountered in aquatic environments. The Gram-negative nature of V. xiamenensis indicates the presence of a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which may play a role in its environmental adaptability and potential interactions with other microorganisms. The rod shape of this bacterium is typical of the Vibrio genus and may contribute to its motility and colonization abilities in various habitats. Vibrio xiamenensis is likely to be found in marine or estuarine environments, where fluctuating oxygen levels and temperatures can be common. The facultative nature of its oxygen requirement suggests that it can effectively utilize available resources regardless of the oxygen concentration, which may provide it with a competitive advantage in diverse microbial communities. Overall, the ecological versatility of V. xiamenensis, characterized by its ability to thrive in varied oxygen conditions and its temperature preference, positions it as a notable player in nutrient cycling processes within aquatic ecosystems. Its adaptive traits may also indicate a role in the decomposition of organic matter in these environments, contributing to the overall health and functioning of aquatic systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio xiamenensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio xiamenensis
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio xiamenensis strain CGMCC 1.10228 genome assembly, contig:

Gene Summary

Adenine Count

1478862 bp

Thymine Count

1469162 bp

Guanine Count

1266883 bp

Cytosine Count

1284609 bp

Genome Length

5501246 bp

Protein-coding Genes

4991 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5SAMN04488136_105154Not AvailableNegative1436111 - 143752951038.9
formate-dependent phosphoribosylglycinamide formyltransferaseSAMN04488136_105155Not AvailablePositive1437802 - 143898042239.5
thiopurine s-methyltransferaseSAMN04488136_105156Not AvailableNegative1439080 - 143973024894.5
ppgpp synthetase catalytic domain-containing protein (rela/spot-type nucleotidyltranferase)SAMN04488136_105157Not AvailablePositive1440076 - 144085228719.3
transcriptional regulator, gntr familySAMN04488136_105158Not AvailablePositive1441067 - 144177726664.1
imidazolonepropionaseSAMN04488136_105159Not AvailablePositive1441916 - 144312143250.9
histidine ammonia-lyaseSAMN04488136_105160Not AvailablePositive1443213 - 144474554111.1
protein-s-isoprenylcysteine o-methyltransferase ste14SAMN04488136_105161Not AvailableNegative1444870 - 144533717808.3
fad/fmn-containing dehydrogenaseSAMN04488136_105162Not AvailableNegative1445402 - 1448434112769.0
protein of unknown functionSAMN04488136_105163Not AvailablePositive1448633 - 144932225607.5

Displaying genes 1291 – 1300 of 5064 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.