Photobacterium jeanii str. R-40508

ovoidfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium jeanii str. R-40508 is a Gram-negative, ovoid-shaped bacterium characterized as a facultative aerobe/anaerobe, exhibiting optimal growth at a temperature of 29.0°C. This microbe does not form spores, indicating a reliance on other survival mechanisms under varying environmental conditions. The Gram-negative cell wall structure of P. jeanii str. R-40508 may contribute to its adaptability in diverse habitats, allowing it to thrive in both aerobic and anaerobic environments. The ovoid morphology suggests potential adaptations for nutrient uptake and colonization in specific ecological niches. Given its optimal growth temperature, P. jeanii str. R-40508 may be well-suited for life in environments that experience moderate thermal conditions, such as shallow marine habitats or estuarine systems. This organism could play a role in nutrient cycling within these ecosystems, although specific ecological interactions remain to be elucidated. Further investigation into its metabolic capabilities and ecological roles could provide insights into its contributions to microbial communities and biogeochemical processes in its native environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium jeanii
StrainR-40508

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photobacterium jeanii str. R-40508
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium jeanii strain R-40508 scaffold9, whole genome

Gene Summary

Adenine Count

1375674 bp

Thymine Count

1395351 bp

Guanine Count

1153295 bp

Cytosine Count

1122712 bp

Genome Length

5047042 bp

Protein-coding Genes

4290 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseA3K86_17650Not AvailablePositive3930698 - 393117716946.4
trna pseudouridine(13) synthase trudA3K86_17655Not AvailablePositive3931204 - 393226839936.5
5'/3'-nucleotidase sureA3K86_17660Not AvailablePositive3932249 - 393299826758.7
protein-l-isoaspartate o-methyltransferaseA3K86_17665Not AvailablePositive3933001 - 393363023133.1
hypothetical proteinA3K86_17670Not AvailablePositive3933634 - 393455433493.2
rna polymerase sigma factor rposA3K86_17675Not AvailablePositive3934619 - 393561137752.9
dna mismatch repair protein mutsA3K86_17680Not AvailableNegative3935699 - 393826995281.2
damage-inducible protein cinaA3K86_17685Not AvailablePositive3938425 - 393893417710.9
dna recombination/repair protein recaA3K86_17690Not AvailablePositive3939049 - 394010437618.3
recx family transcriptional regulatorA3K86_17695Not AvailablePositive3940198 - 394067718848.3

Displaying genes 3491 – 3500 of 4420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.