Photobacterium jeanii str. R-40508

ovoidfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium jeanii str. R-40508 is a Gram-negative, ovoid-shaped bacterium characterized as a facultative aerobe/anaerobe, exhibiting optimal growth at a temperature of 29.0°C. This microbe does not form spores, indicating a reliance on other survival mechanisms under varying environmental conditions. The Gram-negative cell wall structure of P. jeanii str. R-40508 may contribute to its adaptability in diverse habitats, allowing it to thrive in both aerobic and anaerobic environments. The ovoid morphology suggests potential adaptations for nutrient uptake and colonization in specific ecological niches. Given its optimal growth temperature, P. jeanii str. R-40508 may be well-suited for life in environments that experience moderate thermal conditions, such as shallow marine habitats or estuarine systems. This organism could play a role in nutrient cycling within these ecosystems, although specific ecological interactions remain to be elucidated. Further investigation into its metabolic capabilities and ecological roles could provide insights into its contributions to microbial communities and biogeochemical processes in its native environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium jeanii
StrainR-40508

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photobacterium jeanii str. R-40508
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium jeanii strain R-40508 scaffold9, whole genome

Gene Summary

Adenine Count

1375674 bp

Thymine Count

1395351 bp

Guanine Count

1153295 bp

Cytosine Count

1122712 bp

Genome Length

5047042 bp

Protein-coding Genes

4290 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dipeptide/tripeptide permeaseA3K86_13355Not AvailableNegative2941263 - 294265749957.9
transcriptional activator rfahA3K86_13360Not AvailablePositive2943080 - 294358019402.7
utp--glucose-1-phosphate uridylyltransferaseA3K86_13365Not AvailablePositive2943712 - 294461432580.6
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolaseA3K86_13370Not AvailableNegative2944721 - 294557830755.5
Trna-argNot AvailableNot AvailablePositive2946018 - 2946094Not Available
trigger factorA3K86_13380Not AvailablePositive2946502 - 294780348017.3
atp-dependent clp protease proteolytic subunitA3K86_13385Not AvailablePositive2947909 - 294853222955.7
atp-dependent clp protease atp-binding subunit clpxA3K86_13390Not AvailablePositive2948646 - 294992646770.0
endopeptidase laA3K86_13395Not AvailablePositive2950064 - 295243688357.1
dna-binding protein huA3K86_13400Not AvailablePositive2952645 - 29529179359.11

Displaying genes 2641 – 2650 of 4420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.