Photobacterium jeanii str. R-40508

ovoidfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium jeanii str. R-40508 is a Gram-negative, ovoid-shaped bacterium characterized as a facultative aerobe/anaerobe, exhibiting optimal growth at a temperature of 29.0°C. This microbe does not form spores, indicating a reliance on other survival mechanisms under varying environmental conditions. The Gram-negative cell wall structure of P. jeanii str. R-40508 may contribute to its adaptability in diverse habitats, allowing it to thrive in both aerobic and anaerobic environments. The ovoid morphology suggests potential adaptations for nutrient uptake and colonization in specific ecological niches. Given its optimal growth temperature, P. jeanii str. R-40508 may be well-suited for life in environments that experience moderate thermal conditions, such as shallow marine habitats or estuarine systems. This organism could play a role in nutrient cycling within these ecosystems, although specific ecological interactions remain to be elucidated. Further investigation into its metabolic capabilities and ecological roles could provide insights into its contributions to microbial communities and biogeochemical processes in its native environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium jeanii
StrainR-40508

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photobacterium jeanii str. R-40508
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium jeanii strain R-40508 scaffold9, whole genome

Gene Summary

Adenine Count

1375674 bp

Thymine Count

1395351 bp

Guanine Count

1153295 bp

Cytosine Count

1122712 bp

Genome Length

5047042 bp

Protein-coding Genes

4290 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavodoxinA3K86_11185Not AvailableNegative2451998 - 245251619607.0
site-specific tyrosine recombinase xerdA3K86_11190Not AvailablePositive2452746 - 245364234384.4
protein-disulfide isomeraseA3K86_11195Not AvailablePositive2453812 - 245454026215.4
single-stranded-dna-specific exonuclease recjA3K86_11200Not AvailablePositive2454651 - 245637562190.9
peptide chain release factor 2A3K86_11205Not AvailablePositive2456847 - 245774933602.1
lysine--trna ligaseA3K86_11210Not AvailablePositive2457782 - 245928756785.8
hypothetical proteinA3K86_11215Not AvailablePositive2459502 - 245993315811.9
sodium:glutamate symporterA3K86_11220Not AvailablePositive2460462 - 246173644129.1
sigma-54-dependent fis family transcriptional regulatorA3K86_11225Not AvailablePositive2461964 - 246331050368.5
transporterA3K86_11230Not AvailableNegative2463424 - 246388217359.8

Displaying genes 2211 – 2220 of 4420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.