Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS04195Not AvailableNegative852065 - 85233410020.2
universal stress proteinHALXA_RS04200Not AvailableNegative852433 - 85286715669.0
uracil-dna glycosylaseHALXA_RS04205Not AvailablePositive853016 - 85359121231.6
hypothetical proteinHALXA_RS04210Not AvailableNegative853639 - 8538848741.95
23s rrna (uridine(2552)-2'-o)-methyltransferaseHALXA_RS04215Not AvailablePositive854097 - 85487928869.4
ribbon-helix-helix protein, copg familyHALXA_RS04220Not AvailableNegative855021 - 8552006806.83
twin-arginine translocase subunit tatcHALXA_RS04225Not AvailableNegative855295 - 85766484640.3
twin-arginine translocase subunit tatcHALXA_RS04230Not AvailablePositive857837 - 85892839313.5
assimilatory nitrate reductase nasaHALXA_RS04235Not AvailablePositive859384 - 86153775744.3
mfs transporterHALXA_RS04240Not AvailablePositive861557 - 86293947001.3

Displaying genes 971 – 980 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.