Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class i sam-dependent methyltransferaseHALXA_RS04145Not AvailableNegative843470 - 84460641613.0
60s ribosomal export protein nmd3HALXA_RS04150Not AvailableNegative844599 - 84579543681.0
zinc metalloprotease htpxHALXA_RS04155Not AvailablePositive846157 - 84703832346.8
hypothetical proteinHALXA_RS04160Not AvailablePositive847108 - 8473749150.06
hypothetical proteinHALXA_RS04165Not AvailablePositive847435 - 84789015317.3
dna primase regulatory subunit prilHALXA_RS04170Not AvailableNegative847921 - 84901540546.9
alpha/beta fold hydrolaseHALXA_RS04175Not AvailablePositive849239 - 85010831781.6
halod1 output domain-containing proteinHALXA_RS04180Not AvailableNegative850152 - 85046610907.3
helix-turn-helix domain-containing proteinHALXA_RS04185Not AvailableNegative850570 - 85092612958.4
dna polymerase sliding clampHALXA_RS04190Not AvailableNegative851070 - 85181326954.6

Displaying genes 961 – 970 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.