Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinHALXA_RS03950Not AvailableNegative801722 - 80310750557.4
abc transporter atp-binding proteinHALXA_RS03955Not AvailableNegative803091 - 80431144467.9
abc transporter permeaseHALXA_RS03960Not AvailableNegative804325 - 80532035645.1
abc transporter permeaseHALXA_RS03965Not AvailableNegative805322 - 80632036994.8
abc transporter substrate-binding proteinHALXA_RS03970Not AvailableNegative806357 - 80803362010.9
ppc domain-containing dna-binding proteinHALXA_RS03975Not AvailablePositive808326 - 80874515838.8
dna polymerase ii large subunitHALXA_RS03980Not AvailablePositive808747 - 812448137175.0
bgtf surface domain-containing proteinHALXA_RS03985Not AvailablePositive812572 - 81379242065.4
hypothetical proteinHALXA_RS03990Not AvailablePositive813864 - 81420212465.2
hypothetical proteinHALXA_RS03995Not AvailablePositive814471 - 81476411044.7

Displaying genes 921 – 930 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.