Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf5518 domain-containing proteinHALXA_RS03665Not AvailablePositive744258 - 74494124534.8
feccd family abc transporter permeaseHALXA_RS03670Not AvailablePositive745195 - 74635240907.6
abc transporter atp-binding proteinHALXA_RS03675Not AvailablePositive746352 - 74726032977.4
abc transporter substrate-binding proteinHALXA_RS03680Not AvailablePositive747368 - 74857044374.5
abc transporter permeaseHALXA_RS03685Not AvailableNegative748656 - 74999646278.3
abc transporter atp-binding proteinHALXA_RS03690Not AvailableNegative750000 - 75078227917.8
s26 family signal peptidaseHALXA_RS03695Not AvailablePositive750884 - 75168128376.7
hypothetical proteinHALXA_RS21945Not AvailableNegative751724 - 75239222418.7
ribose-5-phosphate isomerase rpiaHALXA_RS03705Not AvailablePositive752858 - 75356524346.3
hypothetical proteinHALXA_RS03710Not AvailableNegative753601 - 75449730912.7

Displaying genes 861 – 870 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.