Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ubiquitin-like small modifier protein samp2HALXA_RS03470Not AvailablePositive704572 - 7048058228.52
rid family detoxifying hydrolaseHALXA_RS03475Not AvailableNegative704818 - 70519813185.3
serine hydroxymethyltransferaseHALXA_RS03480Not AvailablePositive705368 - 70661244348.1
bcct family transporterHALXA_RS03485Not AvailableNegative706796 - 70843357662.9
threonine ammonia-lyaseHALXA_RS03490Not AvailableNegative708708 - 70994343320.2
gcvt family proteinHALXA_RS03495Not AvailableNegative709947 - 71246392531.1
eama family transporterHALXA_RS03500Not AvailableNegative712663 - 71308814153.7
n-methyl-l-tryptophan oxidaseHALXA_RS03505Not AvailableNegative713231 - 71437942749.4
aromatic ring-hydroxylating oxygenase subunit alphaHALXA_RS03510Not AvailablePositive714595 - 71573443725.1
hypothetical proteinHALXA_RS03515Not AvailablePositive715747 - 71611513277.3

Displaying genes 821 – 830 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.