Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporterHALXA_RS02300Not AvailablePositive474164 - 47548346207.9
bacteriorhodopsinHALXA_RS02305Not AvailableNegative475621 - 47637326344.5
methyl-accepting chemotaxis proteinHALXA_RS02310Not AvailableNegative476376 - 47801357831.9
sensor histidine kinaseHALXA_RS02315Not AvailableNegative478172 - 47996264115.9
prephenate dehydrataseHALXA_RS02320Not AvailablePositive480137 - 48095529568.1
cbs domain-containing proteinHALXA_RS02325Not AvailableNegative481005 - 48143014777.0
peroxiredoxinHALXA_RS02330Not AvailablePositive481548 - 48200316373.4
hsp20/alpha crystallin family proteinHALXA_RS02335Not AvailablePositive482113 - 48253215589.0
hypothetical proteinHALXA_RS02340Not AvailablePositive482727 - 48352428758.6
leucine--trna ligaseHALXA_RS02345Not AvailablePositive483708 - 486404102198.0

Displaying genes 601 – 610 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.