Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class i sam-dependent methyltransferaseHALXA_RS02150Not AvailablePositive439162 - 43987226499.6
ph domain-containing proteinHALXA_RS02155Not AvailablePositive440020 - 44055319316.3
dead/deah box helicaseHALXA_RS02160Not AvailablePositive440659 - 44301386721.2
had family hydrolaseHALXA_RS02165Not AvailableNegative443069 - 44371923789.0
class i sam-dependent methyltransferaseHALXA_RS02170Not AvailableNegative443801 - 44449326081.1
cold-shock proteinHALXA_RS02175Not AvailablePositive444766 - 4449607020.82
dj-1/pfpi family proteinHALXA_RS02180Not AvailableNegative445092 - 44568820595.9
hypothetical proteinHALXA_RS02185Not AvailablePositive445998 - 44652817642.3
helix-turn-helix transcriptional regulatorHALXA_RS02190Not AvailablePositive446782 - 44804744395.4
hypothetical proteinHALXA_RS02195Not AvailablePositive448183 - 44891724889.7

Displaying genes 571 – 580 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.