Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinHALXA_RS01805Not AvailablePositive365825 - 36738157731.0
abc transporter permeaseHALXA_RS01810Not AvailablePositive367549 - 36853835825.4
abc transporter permeaseHALXA_RS01815Not AvailablePositive368535 - 36954536339.0
abc transporter atp-binding proteinHALXA_RS01820Not AvailablePositive369553 - 37084847088.5
abc transporter atp-binding proteinHALXA_RS01825Not AvailablePositive370845 - 37226052725.0
hypothetical proteinHALXA_RS01830Not AvailablePositive372400 - 37276213970.7
dmt family transporterHALXA_RS01835Not AvailablePositive373035 - 37398533228.6
hypothetical proteinHALXA_RS01840Not AvailableNegative374039 - 37433810469.2
cdc48 family aaa atpaseHALXA_RS01845Not AvailableNegative374747 - 37697881871.0
nickel pincer cofactor biosynthesis protein larcHALXA_RS01850Not AvailablePositive377173 - 37855249158.4

Displaying genes 501 – 510 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.