Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l2HALXA_RS01655Not AvailableNegative341821 - 34254325579.4
50s ribosomal protein l23HALXA_RS01660Not AvailableNegative342546 - 3428009498.22
50s ribosomal protein l4HALXA_RS01665Not AvailableNegative342797 - 34354927031.3
50s ribosomal protein l3HALXA_RS01670Not AvailableNegative343553 - 34457237258.7
putative rna uridine n3 methyltransferaseHALXA_RS01675Not AvailableNegative344577 - 34545531332.8
Trna-glyNot AvailableNot AvailablePositive345769 - 345839Not Available
duf4112 domain-containing proteinHALXA_RS01685Not AvailableNegative345985 - 34643715902.0
halod1 output domain-containing proteinHALXA_RS01690Not AvailablePositive346885 - 34725313134.7
mth1187 family thiamine-binding proteinHALXA_RS01695Not AvailablePositive347403 - 34773811808.4
heavy-metal-associated domain-containing proteinHALXA_RS01700Not AvailablePositive347832 - 3480417285.24

Displaying genes 471 – 480 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.