Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin family proteinHALXA_RS21435Not AvailablePositive157947 - 15831512691.9
dihydrolipoyl dehydrogenaseHALXA_RS20275Not AvailableNegative158396 - 15987152865.3
zip family metal transporterHALXA_RS20280Not AvailableNegative159975 - 16090732239.2
helix-turn-helix domain-containing proteinHALXA_RS20285Not AvailableNegative161168 - 16157215708.4
sulfite exporter taue/safe family proteinHALXA_RS20290Not AvailableNegative161755 - 16279535588.8
hypothetical proteinHALXA_RS22310Not AvailableNegative162796 - 1629424908.08
universal stress proteinHALXA_RS20295Not AvailablePositive163302 - 16414730791.4
helix-turn-helix domain-containing proteinHALXA_RS22610Not AvailableNegative164116 - 1643769411.06
potassium channel family proteinHALXA_RS20310Not AvailablePositive165468 - 16646936700.9
shoct domain-containing proteinHALXA_RS20315Not AvailablePositive166552 - 16690813338.7

Displaying genes 3941 – 3950 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.