Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amphi-trp domain-containing proteinHALXA_RS20130Not AvailableNegative127702 - 12798010390.9
calcium-translocating p-type atpase, pmca-typeHALXA_RS20135Not AvailableNegative128070 - 13063791917.4
cation-translocating p-type atpaseHALXA_RS20140Not AvailableNegative130899 - 13363797973.7
site-specific integraseHALXA_RS22605Not AvailablePositive134040 - 1341804808.58
maoc/paaz c-terminal domain-containing proteinHALXA_RS20145Not AvailablePositive134232 - 13494826398.5
pyridoxamine 5'-phosphate oxidase family proteinHALXA_RS20150Not AvailablePositive135069 - 13554517854.9
universal stress proteinHALXA_RS20155Not AvailableNegative135598 - 13604716433.1
flavodoxin domain-containing proteinHALXA_RS20160Not AvailablePositive136233 - 13682621583.2
bacterio-opsin activator domain-containing proteinHALXA_RS20165Not AvailableNegative136999 - 13886768681.6
hypothetical proteinHALXA_RS20170Not AvailablePositive139067 - 13939311905.0

Displaying genes 3911 – 3920 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.