Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
padr family transcriptional regulatorHALXA_RS19615Not AvailablePositive19629 - 1992211519.5
hypothetical proteinHALXA_RS22290Not AvailablePositive20216 - 203685353.18
zinc-ribbon domain-containing proteinHALXA_RS22805Not AvailablePositive20376 - 205285471.48
hypothetical proteinHALXA_RS19620Not AvailablePositive20533 - 207608691.82
hypothetical proteinHALXA_RS21310Not AvailableNegative21184 - 2154913891.3
lamin tail domain-containing proteinHALXA_RS21315Not AvailablePositive22016 - 2342549425.8
hypothetical proteinHALXA_RS19630Not AvailablePositive23809 - 2483736841.0
soss complex subunit b family proteinHALXA_RS19635Not AvailablePositive25595 - 2645532325.3
homing endonuclease associated repeat-containing proteinHALXA_RS21325Not AvailablePositive26679 - 2764137068.9
site-specific integraseHALXA_RS22580Not AvailablePositive27808 - 279395329.15

Displaying genes 3791 – 3800 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.