Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
primase-associated proteinHALXA_RS19570Not AvailablePositive12539 - 1405057989.8
site-specific integraseHALXA_RS19575Not AvailablePositive14596 - 1503515947.0
site-specific integraseHALXA_RS19580Not AvailablePositive15218 - 1576319914.2
hypothetical proteinHALXA_RS19585Not AvailablePositive15837 - 1612710467.6
hypothetical proteinHALXA_RS19590Not AvailablePositive16127 - 1646212016.1
helix-turn-helix domain-containing proteinHALXA_RS19595Not AvailablePositive16511 - 1711021739.2
hypothetical proteinHALXA_RS19600Not AvailablePositive17107 - 1761618245.1
duf3972 domain-containing proteinHALXA_RS22285Not AvailablePositive18073 - 182857980.19
helix-turn-helix domain-containing proteinHALXA_RS19610Not AvailablePositive18461 - 1904521556.5
hypothetical proteinHALXA_RS21305Not AvailablePositive19057 - 1958719216.1

Displaying genes 3781 – 3790 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.