Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tobe domain-containing proteinHALXA_RS17220Not AvailableNegative3552496 - 355323626234.4
amino acid abc transporter atp-binding proteinHALXA_RS17225Not AvailableNegative3553307 - 355407427861.6
abc transporter permeaseHALXA_RS17230Not AvailableNegative3554074 - 355479324960.9
substrate-binding domain-containing proteinHALXA_RS17235Not AvailableNegative3554800 - 355578334495.3
padr family transcriptional regulatorHALXA_RS17240Not AvailablePositive3556117 - 355640710944.7
proteasome assembly chaperone family proteinHALXA_RS17245Not AvailableNegative3556519 - 355726226730.3
hypothetical proteinHALXA_RS17250Not AvailableNegative3557322 - 355802026362.8
rsmb/nop family class i sam-dependent rna methyltransferaseHALXA_RS17255Not AvailablePositive3558167 - 355907533357.5
hypothetical proteinHALXA_RS17260Not AvailablePositive3559075 - 355967122472.9
dsre family proteinHALXA_RS17265Not AvailablePositive3559788 - 356012912308.3

Displaying genes 3651 – 3660 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.