Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1508 domain-containing proteinHALXA_RS17175Not AvailableNegative3537856 - 3540768104966.0
orc1/cdc6 family replication initiation proteinHALXA_RS17180Not AvailableNegative3541136 - 354233244700.4
efflux rnd transporter permease subunitHALXA_RS17185Not AvailableNegative3542908 - 354560496777.9
cog1361 s-layer family proteinHALXA_RS17190Not AvailableNegative3545614 - 354714954667.9
fad-dependent oxidoreductaseHALXA_RS17195Not AvailableNegative3547790 - 354911247735.3
duf389 domain-containing proteinHALXA_RS17200Not AvailableNegative3549173 - 355048645521.4
duf357 domain-containing proteinHALXA_RS17205Not AvailablePositive3550634 - 355092110371.9
fumarylacetoacetate hydrolase family proteinHALXA_RS17210Not AvailableNegative3550985 - 355172226653.0
Trna-gluNot AvailableNot AvailablePositive3552007 - 3552081Not Available
hypothetical proteinHALXA_RS22710Not AvailablePositive3552283 - 35524175218.8

Displaying genes 3641 – 3650 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.