Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
srpbcc domain-containing proteinHALXA_RS16970Not AvailableNegative3493896 - 349436017738.1
duf6498-containing proteinHALXA_RS16975Not AvailablePositive3494529 - 349598352333.8
gnat family n-acetyltransferaseHALXA_RS16985Not AvailablePositive3496523 - 349764142231.6
alcohol dehydrogenase catalytic domain-containing proteinHALXA_RS16990Not AvailablePositive3497725 - 349873835538.8
nad-dependent epimerase/dehydratase family proteinHALXA_RS16995Not AvailablePositive3498827 - 349963329234.7
hypothetical proteinHALXA_RS17000Not AvailablePositive3499737 - 350004211112.1
glutathione s-transferase family proteinHALXA_RS17005Not AvailableNegative3500180 - 350118738889.3
na+/h+ antiporter nhac family proteinHALXA_RS17010Not AvailablePositive3501386 - 350295754921.2
tram domain-containing proteinHALXA_RS17015Not AvailablePositive3502954 - 350322610012.4
dna methyltransferaseHALXA_RS17020Not AvailablePositive3503331 - 350441040088.6

Displaying genes 3601 – 3610 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.