Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS22230Not AvailablePositive3463719 - 34638926424.26
php domain-containing proteinHALXA_RS16830Not AvailableNegative3463886 - 346468329536.4
hypothetical proteinHALXA_RS16835Not AvailablePositive3464803 - 346508710555.3
transcription elongation factor spt5HALXA_RS16840Not AvailableNegative3465387 - 346582415824.6
protein translocase sec61 complex subunit gammaHALXA_RS16845Not AvailableNegative3465824 - 34660036128.74
hypothetical proteinHALXA_RS16850Not AvailablePositive3466175 - 34663998401.89
tigr03557 family f420-dependent llm class oxidoreductaseHALXA_RS16855Not AvailableNegative3466443 - 346739934880.2
s1c family serine proteaseHALXA_RS16860Not AvailableNegative3467401 - 346856739579.7
mandelate racemase/muconate lactonizing enzyme family proteinHALXA_RS16865Not AvailableNegative3468750 - 346998845903.5
glucose 1-dehydrogenaseHALXA_RS16870Not AvailableNegative3470071 - 347114138768.3

Displaying genes 3571 – 3580 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.