Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
universal stress proteinHALXA_RS16630Not AvailableNegative3427202 - 342767816947.8
duf655 domain-containing proteinHALXA_RS16635Not AvailableNegative3427760 - 342835622932.4
rna polymerase rpb4 family proteinHALXA_RS16640Not AvailableNegative3428599 - 342895513669.9
50s ribosomal protein l21eHALXA_RS16645Not AvailableNegative3428969 - 342927711355.3
hypothetical proteinHALXA_RS16650Not AvailableNegative3429386 - 342978714774.3
cystathionine gamma-synthaseHALXA_RS16655Not AvailablePositive3429916 - 343110343240.6
mbl fold metallo-hydrolaseHALXA_RS16660Not AvailablePositive3431188 - 343188025039.0
rna ligaseHALXA_RS16665Not AvailableNegative3431908 - 343308044350.4
hypothetical proteinHALXA_RS16670Not AvailablePositive3433444 - 343388716179.9
rna ligase partner proteinHALXA_RS16675Not AvailablePositive3434220 - 343489726096.6

Displaying genes 3531 – 3540 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.