Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-chain fatty acid transporterHALXA_RS16580Not AvailableNegative3414151 - 341559651640.5
glycoside hydrolase family 3 proteinHALXA_RS16585Not AvailableNegative3415853 - 341838791509.0
hypothetical proteinHALXA_RS16590Not AvailableNegative3418529 - 341957238421.5
nitroreductase family proteinHALXA_RS16595Not AvailableNegative3419661 - 342028723722.2
methionine synthaseHALXA_RS16600Not AvailableNegative3420507 - 342158340656.8
hypothetical proteinHALXA_RS16605Not AvailableNegative3421580 - 342258736936.0
gntp family permeaseHALXA_RS16610Not AvailablePositive3422937 - 342434347934.7
hemk2/mtq2 family protein methyltransferaseHALXA_RS16615Not AvailableNegative3424340 - 342495721930.0
mechanosensitive ion channel family proteinHALXA_RS16620Not AvailableNegative3424964 - 342616043245.9
16s ribosomal rna methyltransferase aHALXA_RS16625Not AvailableNegative3426240 - 342707931016.4

Displaying genes 3521 – 3530 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.