Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS16530Not AvailableNegative3403385 - 34035857886.55
abc transporter atp-binding proteinHALXA_RS16535Not AvailableNegative3403578 - 340481344117.9
carbohydrate abc transporter permeaseHALXA_RS16540Not AvailableNegative3404821 - 340585537718.2
carbohydrate abc transporter permeaseHALXA_RS16545Not AvailableNegative3405857 - 340687036755.2
substrate-binding domain-containing proteinHALXA_RS16550Not AvailableNegative3406878 - 340834753676.9
trmb family transcriptional regulatorHALXA_RS16555Not AvailableNegative3408517 - 340960840112.6
hypothetical proteinHALXA_RS16560Not AvailablePositive3409819 - 341070030769.4
hypothetical proteinHALXA_RS16565Not AvailablePositive3410839 - 341160326568.0
carbohydrate kinase family proteinHALXA_RS16570Not AvailableNegative3411626 - 341260334189.2
tigr00366 family proteinHALXA_RS16575Not AvailableNegative3412712 - 341414549938.7

Displaying genes 3511 – 3520 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.