Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mbl fold metallo-hydrolaseHALXA_RS16440Not AvailablePositive3385792 - 338661329497.6
ykgj family cysteine cluster proteinHALXA_RS16445Not AvailablePositive3386687 - 338744526960.6
hypothetical proteinHALXA_RS16450Not AvailableNegative3387545 - 338794613609.8
heptaprenylglyceryl phosphate synthaseHALXA_RS16455Not AvailablePositive3388114 - 338888127013.2
tram domain-containing proteinHALXA_RS16460Not AvailableNegative3389063 - 338947014800.1
radical sam proteinHALXA_RS16465Not AvailableNegative3389612 - 339136064280.1
hypothetical proteinHALXA_RS22220Not AvailablePositive3391510 - 33916685849.67
hsp20/alpha crystallin family proteinHALXA_RS16470Not AvailablePositive3391858 - 339235818100.6
nad(p)/fad-dependent oxidoreductaseHALXA_RS16475Not AvailableNegative3392367 - 339362943750.3
hypothetical proteinHALXA_RS16480Not AvailableNegative3393783 - 339459227957.4

Displaying genes 3491 – 3500 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.