Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lud domain-containing proteinHALXA_RS16195Not AvailableNegative3335380 - 333764482936.7
lutc/ykgg family proteinHALXA_RS16200Not AvailableNegative3337634 - 333819419818.9
iclr family transcriptional regulatorHALXA_RS16205Not AvailablePositive3338412 - 333917628114.3
universal stress proteinHALXA_RS16210Not AvailablePositive3339475 - 333990915500.1
glycoside hydrolase family 2 proteinHALXA_RS16215Not AvailableNegative3339931 - 3342714102753.0
abc transporter atp-binding proteinHALXA_RS16220Not AvailableNegative3342745 - 334397444582.8
hypothetical proteinHALXA_RS22215Not AvailableNegative3343971 - 33441144766.46
yesl family proteinHALXA_RS16225Not AvailableNegative3344111 - 334478223265.5
carbohydrate abc transporter permeaseHALXA_RS16230Not AvailableNegative3344789 - 334565532181.1
carbohydrate abc transporter permeaseHALXA_RS16235Not AvailableNegative3345652 - 334657534041.3

Displaying genes 3441 – 3450 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.