Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mbl fold metallo-hydrolaseHALXA_RS16095Not AvailableNegative3311296 - 331248642704.8
hypothetical proteinHALXA_RS16100Not AvailablePositive3312611 - 331325523546.8
cell division protein ftszHALXA_RS16105Not AvailableNegative3313362 - 331454040866.5
d-aminoacyl-trna deacylaseHALXA_RS16110Not AvailableNegative3314700 - 331603148534.7
pas domain s-box proteinHALXA_RS16115Not AvailablePositive3316205 - 331867691724.5
hypothetical proteinHALXA_RS16120Not AvailablePositive3318775 - 332025052155.9
calcium/sodium antiporterHALXA_RS16125Not AvailableNegative3320294 - 332123831735.9
shikimate dehydrogenaseHALXA_RS16130Not AvailablePositive3321393 - 332220228235.7
helix-hairpin-helix domain-containing proteinHALXA_RS16135Not AvailablePositive3322282 - 332304626810.8
aminodeoxychorismate synthase, component iHALXA_RS16140Not AvailablePositive3323235 - 332489059611.1

Displaying genes 3421 – 3430 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.