Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zn-ribbon domain-containing ob-fold proteinHALXA_RS16045Not AvailablePositive3302443 - 330285014501.3
nucleoside deaminaseHALXA_RS16050Not AvailableNegative3302911 - 330336916653.4
duf5787 family proteinHALXA_RS16055Not AvailableNegative3303468 - 330455040887.9
rdd family proteinHALXA_RS16060Not AvailablePositive3304784 - 330521215240.1
bis(5'-nucleosyl)-tetraphosphataseHALXA_RS16065Not AvailableNegative3305267 - 330569816593.1
us10/ml48 family ribosomal proteinHALXA_RS16070Not AvailablePositive3305881 - 330621612398.3
amidohydrolaseHALXA_RS16075Not AvailablePositive3306284 - 330756145230.4
m48 family metallopeptidaseHALXA_RS16080Not AvailablePositive3307730 - 330894443396.4
geranylgeranyl reductase family proteinHALXA_RS16085Not AvailableNegative3309209 - 331062751549.7
2fe-2s iron-sulfur cluster-binding proteinHALXA_RS16090Not AvailablePositive3310862 - 331120612193.0

Displaying genes 3411 – 3420 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.