Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gfo/idh/moca family proteinHALXA_RS15240Not AvailablePositive3125448 - 312653639949.4
aldehyde dehydrogenase family proteinHALXA_RS15245Not AvailableNegative3127244 - 312869251001.2
abc transporter substrate-binding proteinHALXA_RS15250Not AvailablePositive3129156 - 313089866818.9
fumarylacetoacetate hydrolase family proteinHALXA_RS15255Not AvailablePositive3131038 - 313190731861.9
iclr family transcriptional regulatorHALXA_RS15260Not AvailablePositive3132140 - 313290128320.2
substrate-binding domain-containing proteinHALXA_RS15265Not AvailablePositive3133126 - 313429541794.9
atp-binding cassette domain-containing proteinHALXA_RS15270Not AvailablePositive3134333 - 313515729609.8
abc transporter permeaseHALXA_RS15275Not AvailablePositive3135154 - 313617635694.4
smp-30/gluconolactonase/lre family proteinHALXA_RS15280Not AvailableNegative3136267 - 313714532095.3
nad-dependent epimerase/dehydratase family proteinHALXA_RS15285Not AvailableNegative3137623 - 313861236506.8

Displaying genes 3251 – 3260 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.