Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycoside hydrolase family 4HALXA_RS15195Not AvailableNegative3114036 - 311550555271.6
universal stress proteinHALXA_RS15200Not AvailableNegative3115598 - 311605616566.3
carbohydrate abc transporter permeaseHALXA_RS15205Not AvailableNegative3116533 - 311744433418.0
carbohydrate abc transporter permeaseHALXA_RS15210Not AvailableNegative3117446 - 311837535424.9
extracellular solute-binding proteinHALXA_RS15215Not AvailableNegative3118429 - 311999156943.5
hypothetical proteinHALXA_RS21735Not AvailablePositive3120253 - 31204446833.63
tcp-1/cpn60 chaperonin family proteinHALXA_RS15220Not AvailablePositive3120534 - 312221358323.4
hypothetical proteinHALXA_RS15225Not AvailableNegative3122210 - 312290224933.6
abc transporter atp-binding proteinHALXA_RS15230Not AvailableNegative3122973 - 312418144430.0
sugar phosphate isomerase/epimerase family proteinHALXA_RS15235Not AvailablePositive3124344 - 312531235802.0

Displaying genes 3241 – 3250 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.