Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS14915Not AvailableNegative3043385 - 304426330067.8
pqq-binding-like beta-propeller repeat proteinHALXA_RS14920Not AvailableNegative3044266 - 304570551453.3
flap endonuclease-1HALXA_RS14925Not AvailablePositive3045827 - 304680436336.1
zinc-dependent alcohol dehydrogenase family proteinHALXA_RS14930Not AvailablePositive3046919 - 304794136109.0
nad(p)/fad-dependent oxidoreductaseHALXA_RS14935Not AvailableNegative3047966 - 304915342228.7
hypothetical proteinHALXA_RS22190Not AvailablePositive3049238 - 30493995747.95
nadh-quinone oxidoreductase subunit dHALXA_RS14940Not AvailablePositive3049623 - 305132065016.6
tryptophan synthase subunit betaHALXA_RS14945Not AvailablePositive3051491 - 305264841335.0
hypothetical proteinHALXA_RS22195Not AvailableNegative3052682 - 30528555709.18
hypothetical proteinHALXA_RS14950Not AvailablePositive3052952 - 305335014877.5

Displaying genes 3181 – 3190 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.