Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii/iv secretion system atpase subunitHALXA_RS14870Not AvailablePositive3032498 - 303439971097.6
type ii secretion system f family proteinHALXA_RS14875Not AvailablePositive3034409 - 303654176165.4
class i sam-dependent methyltransferaseHALXA_RS14880Not AvailablePositive3036604 - 303733526061.7
hypothetical proteinHALXA_RS14885Not AvailablePositive3037551 - 303850132678.6
Trna-glyNot AvailableNot AvailablePositive3038741 - 3038811Not Available
hypothetical proteinHALXA_RS14895Not AvailableNegative3038983 - 303941116373.6
pas domain-containing proteinHALXA_RS14900Not AvailableNegative3039607 - 304191986741.0
hypothetical proteinHALXA_RS21095Not AvailablePositive3042070 - 30422226191.31
hypothetical proteinHALXA_RS14905Not AvailablePositive3042268 - 304267513751.0
gnat family n-acetyltransferaseHALXA_RS14910Not AvailablePositive3042765 - 304334321875.2

Displaying genes 3171 – 3180 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.