Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tlpa family protein disulfide reductaseHALXA_RS14730Not AvailablePositive3004555 - 300514520999.4
dna topoisomerase iHALXA_RS14735Not AvailableNegative3005173 - 300765392042.6
glycoside hydrolase family 97 catalytic domain-containing proteinHALXA_RS14740Not AvailableNegative3007891 - 3011715137943.0
flippaseHALXA_RS14745Not AvailableNegative3011865 - 301338553974.9
fxlyd domain-containing proteinHALXA_RS14750Not AvailableNegative3013518 - 301391314478.5
duf2103 domain-containing proteinHALXA_RS14755Not AvailablePositive3014054 - 301483928244.1
hypothetical proteinHALXA_RS14760Not AvailablePositive3014946 - 30151466782.73
hypothetical proteinHALXA_RS14765Not AvailablePositive3015243 - 30155039291.67
dna-directed rna polymerase subunit pHALXA_RS14770Not AvailablePositive3015531 - 30156655206.28
keops complex subunit pcc1HALXA_RS14775Not AvailablePositive3015685 - 30159398969.23

Displaying genes 3141 – 3150 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.